RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os08g35220.1 View Network Show in Genome Browser |
| Other Names | Os08g0453800 |
| Description | cyclin-dependent kinase C-3, putative, expressed |
| Gene Attributes | Chromosome: Chr8 CDS Coordinates (5'-3'): 22219445-22227461 Nucleotide Length: 975 |
| Protein-coding | LOC_Os08g35220 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0009908 | flower development | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0007275 | multicellular organismal development | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0009607 | response to biotic stimulus | Biological Process | IEA | |
| GO:0016301 | kinase activity | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005856 | cytoskeleton | Cellular Component | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0005654 | nucleoplasm | Cellular Component | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g05630 LOC_Os04g56450 LOC_Os04g37904 LOC_Os06g33549 LOC_Os06g48300 LOC_Os02g55560 LOC_Os07g32380 LOC_Os02g15594 LOC_Os06g33530 LOC_Os04g52000 LOC_Os06g44210 More.. |
| Downstream Genes | LOC_Os10g39540 LOC_Os09g38550 LOC_Os09g30100 LOC_Os11g13820 LOC_Os10g29514 LOC_Os09g32810 LOC_Os11g10100 LOC_Os09g15670 LOC_Os09g28560 LOC_Os12g35030 |
| Database Links | |
|---|---|
| Gramene | LOC_Os08g35220.1 |
| Rice Genome Annotation | LOC_Os08g35220.1 |
| Ricechip | LOC_Os08g35220.1 |
| KEGG | osa:9268645 dosa:Os08t0453800-00 |
| Entrez-Gene | 9268645 |