RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os08g35740.1 View Network Show in Genome Browser |
| Other Names | Os08g0459600 |
| Description | 12-oxophytodienoate reductase, putative, expressed |
| Gene Attributes | Chromosome: Chr8 CDS Coordinates (5'-3'): 22547184-22550740 Nucleotide Length: 1185 |
| Protein-coding | LOC_Os08g35740 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006629 | lipid metabolic | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0009607 | response to biotic stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005777 | peroxisome | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os05g44290 LOC_Os03g10370 LOC_Os02g42350 LOC_Os05g04530 LOC_Os06g11290 LOC_Os02g42330 LOC_Os02g56130 LOC_Os02g08480 LOC_Os06g11280 LOC_Os06g11240 LOC_Os03g44150 More.. |
| Downstream Genes | LOC_Os12g41590 LOC_Os09g21110 LOC_Os09g32650 LOC_Os11g06390 LOC_Os10g36650 LOC_Os12g04440 LOC_Os11g04670 LOC_Os11g06750 LOC_Os12g07010 LOC_Os11g05880 |
| Pathways | |
|---|---|
| KEGG Pathways | rn00592 rn01100 |
| Metacyc Pathways | PWY-735 |
| Reference | |
|---|---|
| PubMed | 17938955 |
| Database Links | |
|---|---|
| Gramene | LOC_Os08g35740.1 |
| Rice Genome Annotation | LOC_Os08g35740.1 |
| Ricechip | LOC_Os08g35740.1 |
| KEGG | osa:4345762 dosa:Os08t0459600-01 |
| Entrez-Gene | 4345762 |