RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os08g36150.2 View Network Show in Genome Browser |
| Other Names | Os08g0464000 |
| Description | activator of 90 kDa heat shock protein ATPase homolog, putative, expressed |
| Gene Attributes | Chromosome: Chr8 CDS Coordinates (5'-3'): 22777103-22781160 Nucleotide Length: 1011 |
| Protein-coding | LOC_Os08g36150 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0030234 | enzyme regulator activity | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os05g48810 LOC_Os02g43020 LOC_Os02g20394 LOC_Os04g45480 LOC_Os04g01740 LOC_Os06g11320 LOC_Os01g13760 LOC_Os03g31300 LOC_Os07g30300 LOC_Os02g21970 LOC_Os03g56110 More.. |
| Downstream Genes | LOC_Os09g30418 LOC_Os09g30412 LOC_Os08g39140 LOC_Os12g04440 LOC_Os11g04670 LOC_Os08g36320 LOC_Os12g07720 LOC_Os10g32550 LOC_Os10g37660 LOC_Os11g14220 LOC_Os12g25710 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR1429-3p osa-miR2919 |
| Database Links | |
|---|---|
| Gramene | LOC_Os08g36150.2 |
| Rice Genome Annotation | LOC_Os08g36150.2 |
| Ricechip | LOC_Os08g36150.2 |
| KEGG | osa:4345780 dosa:Os08t0464000-01 |
| Entrez-Gene | 4345780 |