RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os08g36320.3 View Network Show in Genome Browser |
| Other Names | Os08g0465800 |
| Description | decarboxylase, putative, expressed |
| Gene Attributes | Chromosome: Chr8 CDS Coordinates (5'-3'): 22878668-22882948 Nucleotide Length: 1494 |
| Protein-coding | LOC_Os08g36320 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g26814 LOC_Os01g12800 LOC_Os04g01600 LOC_Os01g71300 LOC_Os02g03100 LOC_Os07g25420 LOC_Os06g25439 LOC_Os02g08480 LOC_Os01g42850 LOC_Os04g01650 LOC_Os06g30370 More.. |
| Downstream Genes | LOC_Os10g42250 LOC_Os10g11140 LOC_Os09g10820 LOC_Os09g38030 LOC_Os11g16410 LOC_Os10g37660 LOC_Os09g16910 LOC_Os11g17610 LOC_Os10g41930 LOC_Os11g33240 LOC_Os11g47760 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR815a osa-miR815b osa-miR815c |
| Database Links | |
|---|---|
| Gramene | LOC_Os08g36320.3 |
| Rice Genome Annotation | LOC_Os08g36320.3 |
| Ricechip | LOC_Os08g36320.3 |
| KEGG | osa:4345787 dosa:Os08t0465800-01 |
| Entrez-Gene | 4345787 |