RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os08g36420.2 View Network Show in Genome Browser |
| Other Names | Os08g0467400 |
| Description | metal cation transporter, putative, expressed |
| Gene Attributes | Chromosome: Chr8 CDS Coordinates (5'-3'): 22987094-22995162 Nucleotide Length: 1497 |
| Protein-coding | LOC_Os08g36420 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0005215 | transporter activity | Molecular Function | IEA | |
| GO:0005623 | cell | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g47540 LOC_Os07g12890 LOC_Os03g24600 LOC_Os08g08200 LOC_Os08g10630 LOC_Os03g46470 LOC_Os02g10230 LOC_Os06g37010 LOC_Os05g25194 LOC_Os05g07210 LOC_Os03g29850 More.. |
| Downstream Genes | LOC_Os12g32180 LOC_Os10g37630 LOC_Os11g09280 LOC_Os09g39270 LOC_Os12g41250 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR2932 osa-miR528-5p osa-miR2092-3p |
| Database Links | |
|---|---|
| Gramene | LOC_Os08g36420.2 |
| Rice Genome Annotation | LOC_Os08g36420.2 |
| Ricechip | LOC_Os08g36420.2 |
| KEGG | osa:4345792 dosa:Os08t0467400-01 |
| Entrez-Gene | 4345792 |