RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os08g36440.1 View Network Show in Genome Browser |
| Other Names | Os08g0467500 |
| Description | HVA22, putative, expressed |
| Gene Attributes | Chromosome: Chr8 CDS Coordinates (5'-3'): 22996544-22997904 Nucleotide Length: 402 |
| Protein-coding | LOC_Os08g36440 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0009719 | response to endogenous stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g05670 LOC_Os03g17990 LOC_Os01g39310 LOC_Os07g09680 LOC_Os01g12730 LOC_Os07g31370 LOC_Os03g09140 LOC_Os07g01150 LOC_Os03g49480 LOC_Os05g44050 LOC_Os02g12740 More.. |
| Downstream Genes | LOC_Os12g41170 LOC_Os11g37260 LOC_Os11g48020 LOC_Os11g20384 LOC_Os12g39340 |
| Database Links | |
|---|---|
| Gramene | LOC_Os08g36440.1 |
| Rice Genome Annotation | LOC_Os08g36440.1 |
| Ricechip | LOC_Os08g36440.1 |
| KEGG | osa:4345793 dosa:Os08t0467500-02 |
| Entrez-Gene | 4345793 |