RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os08g36490.1 View Network Show in Genome Browser |
| Other Names | Os08g0468400,Os08g0468300 |
| Description | kinetochore protein, putative, expressed |
| Gene Attributes | Chromosome: Chr8 CDS Coordinates (5'-3'): 23039415-23044624 Nucleotide Length: 2340 |
| Protein-coding | LOC_Os08g36490 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g74170 LOC_Os04g40940 LOC_Os01g65580 LOC_Os02g47150 LOC_Os03g38010 LOC_Os02g57640 LOC_Os04g58690 LOC_Os06g08790 LOC_Os01g63710 LOC_Os07g30110 LOC_Os03g51870 More.. |
| Downstream Genes | LOC_Os12g44390 LOC_Os11g34310 LOC_Os09g31180 LOC_Os10g28230 LOC_Os11g07480 LOC_Os12g41230 LOC_Os10g34750 LOC_Os12g07720 LOC_Os11g32900 LOC_Os12g39070 LOC_Os11g29380 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR5075 |
| Database Links | |
|---|---|
| Gramene | LOC_Os08g36490.1 |
| Rice Genome Annotation | LOC_Os08g36490.1 |
| Ricechip | LOC_Os08g36490.1 |
| KEGG | osa:4345797 osa:9266320 dosa:Os08t0468400-01dosa:Os08t0468300-00 |
| Entrez-Gene | 4345797 |