RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os08g36910.3 View Network Show in Genome Browser |
| Other Names | Os08g0473900 |
| Description | alpha-amylase precursor, putative, expressed |
| Gene Attributes | Chromosome: Chr8 CDS Coordinates (5'-3'): 23340676-23343533 Nucleotide Length: 1191 |
| Protein-coding | LOC_Os08g36910 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0009719 | response to endogenous stimulus | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005576 | extracellular region | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os04g41140 LOC_Os02g56850 LOC_Os03g56580 LOC_Os02g38080 LOC_Os06g05740 LOC_Os04g32330 |
| Downstream Genes | LOC_Os09g39570 LOC_Os11g15520 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR1432-5p osa-miR1439 |
| Reference | |
|---|---|
| PubMed | 20530196 8251627 2263460 9684366 |
| Database Links | |
|---|---|
| Gramene | LOC_Os08g36910.3 |
| Rice Genome Annotation | LOC_Os08g36910.3 |
| Ricechip | LOC_Os08g36910.3 |
| KEGG | osa:4345814 dosa:Os08t0473900-01 |
| Entrez-Gene | 4345814 |