RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os08g36920.1 View Network Show in Genome Browser |
| Other Names | Os08g0474000 |
| Description | AP2 domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr8 CDS Coordinates (5'-3'): 23353882-23355003 Nucleotide Length: 849 |
| Protein-coding | LOC_Os08g36920 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0009607 | response to biotic stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0003677 | DNA binding | Molecular Function | IEA | |
| GO:0003700 | sequence-specific DNA binding transcription factor activity | Molecular Function | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g08330 LOC_Os03g08310 LOC_Os03g01740 LOC_Os01g28790 LOC_Os01g50420 LOC_Os03g05750 LOC_Os02g08440 LOC_Os03g53020 |
| Downstream Genes | LOC_Os11g05380 LOC_Os10g25230 LOC_Os12g05440 |
| Database Links | |
|---|---|
| Gramene | LOC_Os08g36920.1 |
| Rice Genome Annotation | LOC_Os08g36920.1 |
| Ricechip | LOC_Os08g36920.1 |
| KEGG | osa:4345815 dosa:Os08t0474000-01 |
| Entrez-Gene | 4345815 |