RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os08g37130.1 View Network Show in Genome Browser |
| Other Names | Os08g0476300 |
| Description | oxidoreductase, short chain dehydrogenase/reductase family domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr8 CDS Coordinates (5'-3'): 23463933-23468392 Nucleotide Length: 774 |
| Protein-coding | LOC_Os08g37130 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g58400 LOC_Os07g48640 LOC_Os06g08600 LOC_Os04g52400 LOC_Os04g44950 LOC_Os04g30760 LOC_Os03g62590 LOC_Os03g61740 LOC_Os03g59610 LOC_Os03g45194 LOC_Os03g18740 More.. |
| Downstream Genes | LOC_Os12g41590 LOC_Os12g27830 LOC_Os11g32030 LOC_Os11g24484 LOC_Os10g35370 LOC_Os09g17750 LOC_Os08g39960 LOC_Os12g43363 |
| Database Links | |
|---|---|
| Gramene | LOC_Os08g37130.1 |
| Rice Genome Annotation | LOC_Os08g37130.1 |
| Ricechip | LOC_Os08g37130.1 |
| KEGG | osa:4345829 dosa:Os08t0476300-01 |
| Entrez-Gene | 4345829 |