RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os08g37444.3 View Network Show in Genome Browser |
| Other Names | Os08g0480100 |
| Description | signal recognition particle receptor, putative, expressed |
| Gene Attributes | Chromosome: Chr8 CDS Coordinates (5'-3'): 23717585-23722359 Nucleotide Length: 1875 |
| Protein-coding | LOC_Os08g37444 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0005737 | cytoplasm | Cellular Component | IEA | |
| GO:0005783 | endoplasmic reticulum | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os05g49130 LOC_Os02g11030 LOC_Os05g06350 LOC_Os02g43600 LOC_Os01g56600 LOC_Os05g43390 LOC_Os01g14950 LOC_Os05g01262 LOC_Os07g31370 LOC_Os03g09140 LOC_Os01g66330 More.. |
| Downstream Genes | LOC_Os08g40610 LOC_Os09g32274 LOC_Os08g41250 LOC_Os11g36390 LOC_Os11g05552 LOC_Os12g37960 LOC_Os10g34670 LOC_Os12g44390 LOC_Os11g05556 LOC_Os12g37590 LOC_Os12g13950 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os08g37444.3 |
| Rice Genome Annotation | LOC_Os08g37444.3 |
| Ricechip | LOC_Os08g37444.3 |
| KEGG | osa:4345847 dosa:Os08t0480100-01 |
| Entrez-Gene | 4345847 |