RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os08g37700.1 View Network Show in Genome Browser |
| Other Names | Os08g0483200 |
| Description | RNA recognition motif containing protein, putative, expressed |
| Gene Attributes | Chromosome: Chr8 CDS Coordinates (5'-3'): 23871195-23876240 Nucleotide Length: 819 |
| Protein-coding | LOC_Os08g37700 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0003676 | nucleic acid binding | Molecular Function | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0003723 | RNA binding | Molecular Function | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g49820 LOC_Os06g39906 LOC_Os02g49830 LOC_Os05g51150 LOC_Os06g50890 LOC_Os02g50010 LOC_Os04g59570 LOC_Os03g15890 LOC_Os03g05830 LOC_Os02g52140 LOC_Os07g41120 More.. |
| Downstream Genes | LOC_Os10g30370 LOC_Os11g45590 LOC_Os11g41820 LOC_Os10g33230 LOC_Os11g01020 LOC_Os09g33870 LOC_Os08g45240 LOC_Os09g37720 LOC_Os12g01010 LOC_Os09g37620 LOC_Os09g29980 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR1436 osa-miR818a osa-miR818b osa-miR818c osa-miR818d osa-miR818e |
| Database Links | |
|---|---|
| Gramene | LOC_Os08g37700.1 |
| Rice Genome Annotation | LOC_Os08g37700.1 |
| Ricechip | LOC_Os08g37700.1 |
| KEGG | osa:4345863 dosa:Os08t0483200-01 |
| Entrez-Gene | 4345863 |