RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os08g37780.2 View Network Show in Genome Browser |
| Other Names | Os08g0484400 |
| Description | NOL1/NOP2/sun family protein, putative, expressed |
| Gene Attributes | Chromosome: Chr8 CDS Coordinates (5'-3'): 23926908-23934321 Nucleotide Length: 2055 |
| Protein-coding | LOC_Os08g37780 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0003723 | RNA binding | Molecular Function | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g50350 LOC_Os07g47420 LOC_Os03g58810 LOC_Os04g42010 LOC_Os02g56740 LOC_Os01g49330 LOC_Os05g08360 LOC_Os02g57590 LOC_Os01g56620 LOC_Os03g19960 LOC_Os01g33050 More.. |
| Downstream Genes | LOC_Os11g34350 LOC_Os08g41790 LOC_Os10g31520 LOC_Os09g32976 LOC_Os11g37080 LOC_Os12g42370 LOC_Os09g37860 LOC_Os10g42320 LOC_Os09g36530 LOC_Os09g32820 LOC_Os10g27174 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os08g37780.2 |
| Rice Genome Annotation | LOC_Os08g37780.2 |
| Ricechip | LOC_Os08g37780.2 |
| KEGG | osa:4345871 dosa:Os08t0484400-01 |
| Entrez-Gene | 4345871 |