RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os08g37874.1 View Network Show in Genome Browser |
| Other Names | Os08g0485400 |
| Description | 2-nitropropane dioxygenase family, putative, expressed |
| Gene Attributes | Chromosome: Chr8 CDS Coordinates (5'-3'): 23987970-23995743 Nucleotide Length: 993 |
| Protein-coding | LOC_Os08g37874 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0009607 | response to biotic stimulus | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g16550 LOC_Os03g49770 LOC_Os03g18160 LOC_Os02g48840 LOC_Os02g08480 LOC_Os04g48820 LOC_Os07g01020 LOC_Os03g56800 LOC_Os02g50350 LOC_Os03g53500 LOC_Os06g20340 More.. |
| Downstream Genes | LOC_Os10g40590 LOC_Os11g48080 LOC_Os10g01080 LOC_Os12g18770 LOC_Os09g30150 LOC_Os12g18110 LOC_Os09g39560 LOC_Os08g38320 LOC_Os09g26880 |
| Database Links | |
|---|---|
| Gramene | LOC_Os08g37874.1 |
| Rice Genome Annotation | LOC_Os08g37874.1 |
| Ricechip | LOC_Os08g37874.1 |
| KEGG | osa:4345877 dosa:Os08t0485400-02 |
| Entrez-Gene | 4345877 |