RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os08g37960.3 View Network Show in Genome Browser |
| Other Names | Os08g0486200 |
| Description | RNA recognition motif containing protein, expressed |
| Gene Attributes | Chromosome: Chr8 CDS Coordinates (5'-3'): 24040240-24043302 Nucleotide Length: 849 |
| Protein-coding | LOC_Os08g37960 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0003676 | nucleic acid binding | Molecular Function | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0003723 | RNA binding | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005654 | nucleoplasm | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g39720 LOC_Os07g47630 LOC_Os05g48960 LOC_Os02g12850 LOC_Os01g72890 LOC_Os02g01740 LOC_Os07g07220 LOC_Os06g08840 LOC_Os02g05310 LOC_Os02g54770 LOC_Os03g17010 More.. |
| Downstream Genes | LOC_Os10g06130 LOC_Os09g12800 LOC_Os10g02630 LOC_Os11g14430 LOC_Os11g43620 LOC_Os09g02284 LOC_Os12g18880 LOC_Os09g31482 LOC_Os10g35550 LOC_Os10g34520 LOC_Os10g10990 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os08g37960.3 |
| Rice Genome Annotation | LOC_Os08g37960.3 |
| Ricechip | LOC_Os08g37960.3 |
| KEGG | osa:4345884 dosa:Os08t0486200-01 |
| Entrez-Gene | 4345884 |