RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os08g38270.1 View Network Show in Genome Browser |
| Other Names | Os08g0490600 |
| Description | fasciclin domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr8 CDS Coordinates (5'-3'): 24252684-24253935 Nucleotide Length: 816 |
| Protein-coding | LOC_Os08g38270 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0005618 | cell wall | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os08g23180 LOC_Os01g67240 LOC_Os02g01700 LOC_Os03g06350 LOC_Os03g20760 LOC_Os07g41600 LOC_Os01g46340 LOC_Os03g50030 |
| Downstream Genes | LOC_Os11g02350 LOC_Os10g22590 |
| Database Links | |
|---|---|
| Gramene | LOC_Os08g38270.1 |
| Rice Genome Annotation | LOC_Os08g38270.1 |
| Ricechip | LOC_Os08g38270.1 |
| KEGG | osa:4345902 dosa:Os08t0490600-01 |
| Entrez-Gene | 4345902 |