RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os08g38320.1 View Network Show in Genome Browser |
| Other Names | Os08g0491200 |
| Description | AGC_PVPK_like_kin82y.14 - ACG kinases include homologs to PKA, PKG and PKC, expressed |
| Gene Attributes | Chromosome: Chr8 CDS Coordinates (5'-3'): 24274009-24277516 Nucleotide Length: 1785 |
| Protein-coding | LOC_Os08g38320 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0016301 | kinase activity | Molecular Function | IEA | |
| GO:0005737 | cytoplasm | Cellular Component | IEA | |
| GO:0005730 | nucleolus | Cellular Component | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os07g32380 LOC_Os05g32600 LOC_Os01g09460 LOC_Os01g51200 LOC_Os04g38870 LOC_Os02g01740 LOC_Os03g06510 LOC_Os06g33549 LOC_Os02g36974 LOC_Os07g30300 LOC_Os02g02560 More.. |
| Downstream Genes | LOC_Os09g38030 LOC_Os12g41180 LOC_Os09g10720 LOC_Os10g11140 LOC_Os10g41520 LOC_Os12g30150 LOC_Os11g08300 LOC_Os11g07040 LOC_Os12g07230 LOC_Os10g33650 LOC_Os10g42250 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR5825 |
| Database Links | |
|---|---|
| Gramene | LOC_Os08g38320.1 |
| Rice Genome Annotation | LOC_Os08g38320.1 |
| Ricechip | LOC_Os08g38320.1 |
| KEGG | osa:4345907 dosa:Os08t0491200-01 |
| Entrez-Gene | 4345907 |