RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os08g38400.1 View Network Show in Genome Browser |
| Other Names | Os08g0492000 |
| Description | oligopeptide transporter, putative, expressed |
| Gene Attributes | Chromosome: Chr8 CDS Coordinates (5'-3'): 24311040-24314820 Nucleotide Length: 2259 |
| Protein-coding | LOC_Os08g38400 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0005215 | transporter activity | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g40450 LOC_Os04g46320 LOC_Os05g35050 LOC_Os01g57260 LOC_Os03g56110 LOC_Os03g04240 LOC_Os02g44500 LOC_Os03g06740 LOC_Os02g56850 LOC_Os05g05200 LOC_Os03g04250 More.. |
| Downstream Genes | LOC_Os11g18170 LOC_Os10g21590 LOC_Os12g34380 LOC_Os12g38100 LOC_Os11g42350 |
| Database Links | |
|---|---|
| Gramene | LOC_Os08g38400.1 |
| Rice Genome Annotation | LOC_Os08g38400.1 |
| Ricechip | LOC_Os08g38400.1 |
| KEGG | osa:4345909 dosa:Os08t0492000-01 |
| Entrez-Gene | 4345909 |