RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os08g38460.1 View Network Show in Genome Browser |
| Other Names | Os08g0492500 |
| Description | zinc finger, C3HC4 type domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr8 CDS Coordinates (5'-3'): 24336013-24337028 Nucleotide Length: 504 |
| Protein-coding | LOC_Os08g38460 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006629 | lipid metabolic | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0009719 | response to endogenous stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g27030 LOC_Os04g58620 LOC_Os02g28720 LOC_Os04g24600 LOC_Os02g48560 LOC_Os04g44650 LOC_Os02g42570 LOC_Os04g31340 LOC_Os03g31490 LOC_Os06g30310 LOC_Os03g51030 More.. |
| Downstream Genes | LOC_Os09g25090 LOC_Os10g35670 LOC_Os08g40930 LOC_Os10g13670 LOC_Os12g01449 LOC_Os11g01439 LOC_Os09g33520 LOC_Os09g23540 LOC_Os09g37020 |
| Database Links | |
|---|---|
| Gramene | LOC_Os08g38460.1 |
| Rice Genome Annotation | LOC_Os08g38460.1 |
| Ricechip | LOC_Os08g38460.1 |
| KEGG | osa:4345912 dosa:Os08t0492500-01 |
| Entrez-Gene | 4345912 |