RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os08g38570.1 View Network Show in Genome Browser |
| Other Names | Os08g0493900 |
| Description | WD domain, G-beta repeat domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr8 CDS Coordinates (5'-3'): 24384370-24389116 Nucleotide Length: 2550 |
| Protein-coding | LOC_Os08g38570 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os04g40840 LOC_Os07g37640 LOC_Os01g59140 LOC_Os06g45070 LOC_Os03g60700 LOC_Os03g44310 LOC_Os07g44620 LOC_Os03g29470 LOC_Os07g34740 LOC_Os02g12600 LOC_Os01g51200 More.. |
| Downstream Genes | LOC_Os08g43370 LOC_Os11g37080 LOC_Os09g02284 LOC_Os11g04180 LOC_Os12g03990 LOC_Os09g30210 LOC_Os09g35970 LOC_Os09g17850 LOC_Os12g42260 LOC_Os10g28040 LOC_Os11g05730 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os08g38570.1 |
| Rice Genome Annotation | LOC_Os08g38570.1 |
| Ricechip | LOC_Os08g38570.1 |
| KEGG | osa:4345916 dosa:Os08t0493900-01 |
| Entrez-Gene | 4345916 |