RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os08g38720.1 View Network Show in Genome Browser |
| Other Names | Os08g0496000 |
| Description | cytochrome c oxidase assembly protein COX15, putative, expressed |
| Gene Attributes | Chromosome: Chr8 CDS Coordinates (5'-3'): 24482352-24486058 Nucleotide Length: 1449 |
| Protein-coding | LOC_Os08g38720 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0016043 | cellular component organization | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g32490 LOC_Os02g32120 LOC_Os04g33190 LOC_Os04g32660 LOC_Os01g11300 LOC_Os03g12900 LOC_Os01g34390 LOC_Os08g02640 LOC_Os02g04710 LOC_Os03g12910 LOC_Os01g11340 More.. |
| Downstream Genes | LOC_Os09g07830 LOC_Os11g32240 LOC_Os11g08569 LOC_Os12g43740 LOC_Os12g03090 LOC_Os11g03400 LOC_Os10g42840 LOC_Os08g43170 LOC_Os09g36770 LOC_Os11g06890 LOC_Os11g18194 More.. |
| Pathways | |
|---|---|
| Metacyc Pathways | PWY-3781 |
| Database Links | |
|---|---|
| Gramene | LOC_Os08g38720.1 |
| Rice Genome Annotation | LOC_Os08g38720.1 |
| Ricechip | LOC_Os08g38720.1 |
| KEGG | osa:4345926 dosa:Os08t0496000-01 |
| Entrez-Gene | 4345926 |