RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os08g38820.1 View Network Show in Genome Browser |
| Other Names | Os08g0496900 |
| Description | transmembrane 9 superfamily member, putative, expressed |
| Gene Attributes | Chromosome: Chr8 CDS Coordinates (5'-3'): 24537686-24542173 Nucleotide Length: 1986 |
| Protein-coding | LOC_Os08g38820 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| GO:0005794 | Golgi apparatus | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005773 | vacuole | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os07g45280 LOC_Os02g11110 LOC_Os01g68160 LOC_Os02g13560 LOC_Os01g14610 LOC_Os04g42140 LOC_Os04g46620 LOC_Os03g63550 LOC_Os01g13800 LOC_Os08g03520 LOC_Os02g27769 More.. |
| Downstream Genes | LOC_Os08g45010 LOC_Os12g32240 |
| Database Links | |
|---|---|
| Gramene | LOC_Os08g38820.1 |
| Rice Genome Annotation | LOC_Os08g38820.1 |
| Ricechip | LOC_Os08g38820.1 |
| KEGG | osa:4345930 dosa:Os08t0496900-01 |
| Entrez-Gene | 4345930 |