RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os08g39370.1 View Network Show in Genome Browser |
| Other Names | Os08g0503700 |
| Description | citrate transporter, putative, expressed |
| Gene Attributes | Chromosome: Chr8 CDS Coordinates (5'-3'): 24882925-24886350 Nucleotide Length: 1647 |
| Protein-coding | LOC_Os08g39370 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0019725 | cellular homeostasis | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0005215 | transporter activity | Molecular Function | IEA | |
| GO:0005773 | vacuole | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os04g10750 LOC_Os08g37600 LOC_Os04g10690 LOC_Os02g57620 LOC_Os01g44130 LOC_Os03g05390 LOC_Os06g40120 LOC_Os03g61200 LOC_Os03g01700 LOC_Os03g05610 LOC_Os04g40730 More.. |
| Downstream Genes | LOC_Os12g33080 LOC_Os10g30790 LOC_Os10g39980 LOC_Os10g30770 LOC_Os08g45000 LOC_Os12g15590 LOC_Os11g31640 LOC_Os11g48090 LOC_Os09g27210 LOC_Os09g38530 LOC_Os09g31130 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR531b |
| Database Links | |
|---|---|
| Gramene | LOC_Os08g39370.1 |
| Rice Genome Annotation | LOC_Os08g39370.1 |
| Ricechip | LOC_Os08g39370.1 |
| KEGG | osa:4345968 dosa:Os08t0503700-01 |
| Entrez-Gene | 4345968 |