RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os08g39440.1 View Network Show in Genome Browser |
| Other Names | Os08g0504600 |
| Description | RNA recognition motif containing protein, putative, expressed |
| Gene Attributes | Chromosome: Chr8 CDS Coordinates (5'-3'): 24938689-24947051 Nucleotide Length: 2130 |
| Protein-coding | LOC_Os08g39440 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0003676 | nucleic acid binding | Molecular Function | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0003723 | RNA binding | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os07g41120 |
| Downstream Genes | LOC_Os09g07900 LOC_Os12g18530 LOC_Os12g43600 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR5075 |
| Database Links | |
|---|---|
| Gramene | LOC_Os08g39440.1 |
| Rice Genome Annotation | LOC_Os08g39440.1 |
| Ricechip | LOC_Os08g39440.1 |
| KEGG | osa:4345972 dosa:Os08t0504600-01 |
| Entrez-Gene | 4345972 |