RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os08g39490.1 View Network Show in Genome Browser |
| Other Names | Os08g0505250,Os08g0505200 |
| Description | expressed protein |
| Gene Attributes | Chromosome: Chr8 CDS Coordinates (5'-3'): 24986083-24991220 Nucleotide Length: 2064 |
| Protein-coding | LOC_Os08g39490 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g56380 LOC_Os01g55950 LOC_Os06g05550 LOC_Os07g44070 LOC_Os04g57800 LOC_Os01g59870 LOC_Os07g27810 LOC_Os01g27140 LOC_Os03g04310 LOC_Os04g38570 LOC_Os03g50810 More.. |
| Downstream Genes | LOC_Os09g36350 LOC_Os09g32080 LOC_Os12g35330 LOC_Os09g28850 LOC_Os11g43750 LOC_Os11g44810 LOC_Os10g19880 LOC_Os08g41280 |
| Database Links | |
|---|---|
| Gramene | LOC_Os08g39490.1 |
| Rice Genome Annotation | LOC_Os08g39490.1 |
| Ricechip | LOC_Os08g39490.1 |
| KEGG | osa:4345975 dosa:Os08t0505250-00dosa:Os08t0505200-01 |