RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os08g39880.1 View Network Show in Genome Browser |
| Other Names | Os08g0509500 |
| Description | G-patch domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr8 CDS Coordinates (5'-3'): 25270058-25273628 Nucleotide Length: 744 |
| Protein-coding | LOC_Os08g39880 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0003676 | nucleic acid binding | Molecular Function | IEA | |
| GO:0005622 | intracellular | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os08g19170 LOC_Os03g14860 LOC_Os03g03390 LOC_Os01g07540 LOC_Os02g55000 LOC_Os01g34190 LOC_Os07g32570 LOC_Os05g06840 LOC_Os03g61210 LOC_Os03g46610 LOC_Os03g22890 More.. |
| Downstream Genes | LOC_Os12g42140 LOC_Os10g31000 LOC_Os11g45250 |
| Database Links | |
|---|---|
| Gramene | LOC_Os08g39880.1 |
| Rice Genome Annotation | LOC_Os08g39880.1 |
| Ricechip | LOC_Os08g39880.1 |
| KEGG | osa:4345997 dosa:Os08t0509500-01 |
| Entrez-Gene | 4345997 |