RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os08g40030.1 View Network Show in Genome Browser |
| Other Names | Os08g0511200 |
| Description | CUP-SHAPED COTYLEDON3, putative, expressed |
| Gene Attributes | Chromosome: Chr8 CDS Coordinates (5'-3'): 25351524-25353753 Nucleotide Length: 1023 |
| Protein-coding | LOC_Os08g40030 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009653 | anatomical structure morphogenesis | Biological Process | IEA | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0007275 | multicellular organismal development | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0003700 | sequence-specific DNA binding transcription factor activity | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g19180 LOC_Os01g55950 LOC_Os08g16930 |
| Database Links | |
|---|---|
| Gramene | LOC_Os08g40030.1 |
| Rice Genome Annotation | LOC_Os08g40030.1 |
| Ricechip | LOC_Os08g40030.1 |
| KEGG | osa:4346008 dosa:Os08t0511200-00 |
| Entrez-Gene | 4346008 |