RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os08g40090.1 View Network Show in Genome Browser |
| Other Names | Os08g0511700 |
| Description | leucine rich repeat containing protein, expressed |
| Gene Attributes | Chromosome: Chr8 CDS Coordinates (5'-3'): 25377687-25381281 Nucleotide Length: 1731 |
| Protein-coding | LOC_Os08g40090 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os06g05550 LOC_Os05g37830 LOC_Os02g25650 LOC_Os03g50810 LOC_Os07g18720 LOC_Os02g07250 LOC_Os02g06600 LOC_Os03g11340 |
| Downstream Genes | LOC_Os11g44810 LOC_Os09g31970 LOC_Os08g40180 LOC_Os09g21000 LOC_Os09g36520 LOC_Os11g39310 |
| Database Links | |
|---|---|
| Gramene | LOC_Os08g40090.1 |
| Rice Genome Annotation | LOC_Os08g40090.1 |
| Ricechip | LOC_Os08g40090.1 |
| KEGG | osa:4346010 dosa:Os08t0511700-00 |
| Entrez-Gene | 4346010 |