RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os08g40170.2 View Network Show in Genome Browser |
| Other Names | Os08g0512600 |
| Description | cyclin-dependent kinase B2-1, putative, expressed |
| Gene Attributes | Chromosome: Chr8 CDS Coordinates (5'-3'): 25419884-25421827 Nucleotide Length: 867 |
| Protein-coding | LOC_Os08g40170 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009653 | anatomical structure morphogenesis | Biological Process | IEA | |
| GO:0007049 | cell cycle | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0007275 | multicellular organismal development | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0009719 | response to endogenous stimulus | Biological Process | IEA | |
| GO:0007165 | signal transduction | Biological Process | IEA | |
| GO:0016301 | kinase activity | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g05630 LOC_Os06g48300 LOC_Os04g37904 LOC_Os04g56450 LOC_Os06g33549 LOC_Os02g55560 LOC_Os06g33530 LOC_Os04g47580 LOC_Os01g59120 LOC_Os01g08150 LOC_Os02g15810 More.. |
| Downstream Genes | LOC_Os08g44420 LOC_Os08g44410 LOC_Os12g02710 LOC_Os11g02740 LOC_Os12g41230 LOC_Os09g38450 LOC_Os12g01700 LOC_Os11g01620 LOC_Os10g39540 LOC_Os09g29100 LOC_Os10g42660 More.. |
| Reference | |
|---|---|
| PubMed | 22092531 9880343 |
| Database Links | |
|---|---|
| Gramene | LOC_Os08g40170.2 |
| Rice Genome Annotation | LOC_Os08g40170.2 |
| Ricechip | LOC_Os08g40170.2 |
| KEGG | osa:4346016 dosa:Os08t0512600-01 |
| Entrez-Gene | 4346016 |