RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os08g40230.1 View Network Show in Genome Browser |
| Other Names | Os08g0513300 |
| Description | expressed protein |
| Gene Attributes | Chromosome: Chr8 CDS Coordinates (5'-3'): 25444463-25450083 Nucleotide Length: 1170 |
| Protein-coding | LOC_Os08g40230 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os05g40820 LOC_Os03g17930 LOC_Os02g09140 LOC_Os02g34840 LOC_Os03g30570 |
| Downstream Genes | LOC_Os09g12600 LOC_Os11g37690 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR396c-5p |
| Database Links | |
|---|---|
| Gramene | LOC_Os08g40230.1 |
| Rice Genome Annotation | LOC_Os08g40230.1 |
| Ricechip | LOC_Os08g40230.1 |
| KEGG | osa:4346021 dosa:Os08t0513300-01 |
| Entrez-Gene | 4346021 |