RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os08g40420.1 View Network Show in Genome Browser |
| Other Names | Os08g0515700 |
| Description | ternary complex factor MIP1, putative, expressed |
| Gene Attributes | Chromosome: Chr8 CDS Coordinates (5'-3'): 25584780-25590222 Nucleotide Length: 1617 |
| Protein-coding | LOC_Os08g40420 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os06g42800 LOC_Os04g42620 LOC_Os01g59150 LOC_Os04g58130 LOC_Os05g02820 LOC_Os07g38590 LOC_Os01g39830 LOC_Os03g03164 LOC_Os01g71474 LOC_Os04g31410 LOC_Os01g71280 More.. |
| Downstream Genes | LOC_Os09g27700 LOC_Os11g26190 LOC_Os12g38360 LOC_Os09g36730 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR1864 |
| Database Links | |
|---|---|
| Gramene | LOC_Os08g40420.1 |
| Rice Genome Annotation | LOC_Os08g40420.1 |
| Ricechip | LOC_Os08g40420.1 |
| KEGG | osa:4346031 dosa:Os08t0515700-01 |
| Entrez-Gene | 4346031 |