RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os08g40590.2 View Network Show in Genome Browser |
| Other Names | Os08g0517700 |
| Description | oxysterol-binding protein, putative, expressed |
| Gene Attributes | Chromosome: Chr8 CDS Coordinates (5'-3'): 25696445-25699639 Nucleotide Length: 1176 |
| Protein-coding | LOC_Os08g40590 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006629 | lipid metabolic | Biological Process | IEA | |
| GO:0008289 | lipid binding | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g63800 LOC_Os03g49770 LOC_Os02g13640 LOC_Os01g42850 LOC_Os07g32800 LOC_Os04g53240 LOC_Os07g25420 LOC_Os05g46720 LOC_Os06g07630 LOC_Os04g40850 LOC_Os01g36930 More.. |
| Downstream Genes | LOC_Os10g40590 LOC_Os12g18770 LOC_Os08g43640 LOC_Os09g37000 LOC_Os11g04220 LOC_Os09g15750 LOC_Os09g19790 LOC_Os10g42250 LOC_Os09g34970 |
| Database Links | |
|---|---|
| Gramene | LOC_Os08g40590.2 |
| Rice Genome Annotation | LOC_Os08g40590.2 |
| Ricechip | LOC_Os08g40590.2 |
| KEGG | osa:4346042 dosa:Os08t0517700-02 |
| Entrez-Gene | 4346042 |