RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os08g40620.2 View Network Show in Genome Browser |
| Other Names | Os08g0518100 |
| Description | rabGAP/TBC domain-containing protein, putative, expressed |
| Gene Attributes | Chromosome: Chr8 CDS Coordinates (5'-3'): 25712814-25717641 Nucleotide Length: 2394 |
| Protein-coding | LOC_Os08g40620 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0007165 | signal transduction | Biological Process | IEA | |
| GO:0030234 | enzyme regulator activity | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os08g25010 LOC_Os02g48000 LOC_Os01g61860 |
| Downstream Genes | LOC_Os11g37690 LOC_Os09g35960 |
| Database Links | |
|---|---|
| Gramene | LOC_Os08g40620.2 |
| Rice Genome Annotation | LOC_Os08g40620.2 |
| Ricechip | LOC_Os08g40620.2 |
| KEGG | osa:4346046 dosa:Os08t0518100-01 |
| Entrez-Gene | 4346046 |