RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os08g41290.1 View Network Show in Genome Browser |
| Other Names | Os08g0524400 |
| Description | AIR12, putative, expressed |
| Gene Attributes | Chromosome: Chr8 CDS Coordinates (5'-3'): 26086542-26087834 Nucleotide Length: 792 |
| Protein-coding | LOC_Os08g41290 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009653 | anatomical structure morphogenesis | Biological Process | IEA | |
| GO:0016043 | cellular component organization | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0009791 | post-embryonic development | Biological Process | IEA | |
| GO:0009719 | response to endogenous stimulus | Biological Process | IEA | |
| GO:0005198 | structural molecule activity | Molecular Function | IEA | |
| GO:0005576 | extracellular region | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g67030 LOC_Os01g48850 LOC_Os01g55110 LOC_Os01g66270 LOC_Os07g47510 LOC_Os06g49520 |
| Downstream Genes | LOC_Os09g38520 |
| Database Links | |
|---|---|
| Gramene | LOC_Os08g41290.1 |
| Rice Genome Annotation | LOC_Os08g41290.1 |
| Ricechip | LOC_Os08g41290.1 |
| KEGG | osa:4346085 dosa:Os08t0524400-00 |
| Entrez-Gene | 4346085 |