RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os08g41390.2 View Network Show in Genome Browser |
| Other Names | Os08g0525600 |
| Description | peptidyl-prolyl isomerase, putative, expressed |
| Gene Attributes | Chromosome: Chr8 CDS Coordinates (5'-3'): 26138467-26144408 Nucleotide Length: 1743 |
| Protein-coding | LOC_Os08g41390 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005737 | cytoplasm | Cellular Component | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g53280 LOC_Os01g08560 LOC_Os02g02550 LOC_Os03g50080 LOC_Os07g20544 LOC_Os07g49000 LOC_Os04g59394 LOC_Os03g19200 LOC_Os06g41750 LOC_Os03g15740 LOC_Os02g51730 More.. |
| Downstream Genes | LOC_Os09g32526 LOC_Os12g41190 LOC_Os10g32300 LOC_Os09g36740 LOC_Os08g44510 LOC_Os11g30410 LOC_Os10g36250 LOC_Os09g30412 LOC_Os09g30418 LOC_Os11g06890 LOC_Os09g12290 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os08g41390.2 |
| Rice Genome Annotation | LOC_Os08g41390.2 |
| Ricechip | LOC_Os08g41390.2 |
| KEGG | osa:4346090 dosa:Os08t0525600-01 |
| Entrez-Gene | 4346090 |