RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os08g41470.2 View Network Show in Genome Browser |
| Other Names | Os08g0526400 |
| Description | proteophosphoglycan ppg4, putative, expressed |
| Gene Attributes | Chromosome: Chr8 CDS Coordinates (5'-3'): 26192691-26196096 Nucleotide Length: 759 |
| Protein-coding | LOC_Os08g41470 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008219 | cell death | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0009607 | response to biotic stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0007165 | signal transduction | Biological Process | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os08g09430 LOC_Os04g46300 LOC_Os02g24612 LOC_Os01g61460 LOC_Os08g03350 LOC_Os07g01560 |
| Downstream Genes | LOC_Os10g07978 |
| Database Links | |
|---|---|
| Gramene | LOC_Os08g41470.2 |
| Rice Genome Annotation | LOC_Os08g41470.2 |
| Ricechip | LOC_Os08g41470.2 |
| KEGG | osa:4346097 dosa:Os08t0526400-01 |
| Entrez-Gene | 4346097 |