RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os08g41730.1 View Network Show in Genome Browser |
| Other Names | Os08g0529100 |
| Description | peptidase, T1 family, putative, expressed |
| Gene Attributes | Chromosome: Chr8 CDS Coordinates (5'-3'): 26342315-26344539 Nucleotide Length: 660 |
| Protein-coding | LOC_Os08g41730 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0019538 | protein metabolic process | Biological Process | IEA | |
| GO:0009607 | response to biotic stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0005622 | intracellular | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g08280 LOC_Os06g07978 LOC_Os06g07878 LOC_Os06g07140 LOC_Os02g04100 LOC_Os01g32800 LOC_Os03g11570 LOC_Os07g49150 LOC_Os03g63430 LOC_Os01g16190 LOC_Os05g30800 More.. |
| Downstream Genes | LOC_Os11g40140 LOC_Os09g02284 LOC_Os08g43540 LOC_Os09g36710 LOC_Os09g33986 LOC_Os12g15590 LOC_Os11g18170 LOC_Os08g43640 LOC_Os09g37000 LOC_Os08g44240 LOC_Os09g39500 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os08g41730.1 |
| Rice Genome Annotation | LOC_Os08g41730.1 |
| Ricechip | LOC_Os08g41730.1 |
| KEGG | osa:4346117 dosa:Os08t0529100-01 |
| Entrez-Gene | 4346117 |