RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os08g41830.1 View Network Show in Genome Browser |
| Other Names | Os08g0530400 |
| Description | sulfite oxidase, putative, expressed |
| Gene Attributes | Chromosome: Chr8 CDS Coordinates (5'-3'): 26417743-26422698 Nucleotide Length: 1194 |
| Protein-coding | LOC_Os08g41830 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005739 | mitochondrion | Cellular Component | IEA | |
| GO:0005777 | peroxisome | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g16414 LOC_Os03g31550 LOC_Os03g10790 LOC_Os08g30740 LOC_Os02g42740 LOC_Os03g20470 LOC_Os03g08280 LOC_Os06g47350 LOC_Os02g17870 LOC_Os02g42134 LOC_Os08g14320 More.. |
| Downstream Genes | LOC_Os10g35870 LOC_Os10g35850 LOC_Os11g37640 LOC_Os08g42530 |
| Pathways | |
|---|---|
| KEGG Pathways | rn00920 rn01120 |
| Database Links | |
|---|---|
| Gramene | LOC_Os08g41830.1 |
| Rice Genome Annotation | LOC_Os08g41830.1 |
| Ricechip | LOC_Os08g41830.1 |
| KEGG | osa:4346125 dosa:Os08t0530400-01 |
| Entrez-Gene | 4346125 |