RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os08g42040.1 View Network Show in Genome Browser |
| Other Names | Os08g0532800 |
| Description | LTPL80 - Protease inhibitor/seed storage/LTP family protein precursor, expressed |
| Gene Attributes | Chromosome: Chr8 CDS Coordinates (5'-3'): 26554150-26557081 Nucleotide Length: 540 |
| Protein-coding | LOC_Os08g42040 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g59870 LOC_Os03g45400 LOC_Os04g44610 LOC_Os05g02310 LOC_Os06g45990 LOC_Os05g41030 |
| Downstream Genes | LOC_Os12g02340 LOC_Os12g02310 LOC_Os11g02424 LOC_Os11g02369 LOC_Os11g02400 LOC_Os12g02330 LOC_Os10g19880 LOC_Os11g02389 LOC_Os11g24070 |
| Database Links | |
|---|---|
| Gramene | LOC_Os08g42040.1 |
| Rice Genome Annotation | LOC_Os08g42040.1 |
| Ricechip | LOC_Os08g42040.1 |
| KEGG | osa:4346142 dosa:Os08t0532800-02 |
| Entrez-Gene | 4346142 |