RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os08g42080.1 View Network Show in Genome Browser |
| Other Names | Os08g0533300 |
| Description | ACR5, putative, expressed |
| Gene Attributes | Chromosome: Chr8 CDS Coordinates (5'-3'): 26572162-26574946 Nucleotide Length: 1407 |
| Protein-coding | LOC_Os08g42080 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0009719 | response to endogenous stimulus | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os07g32590 LOC_Os07g25410 LOC_Os04g52100 LOC_Os02g52420 LOC_Os04g58630 LOC_Os01g54020 LOC_Os07g38300 LOC_Os04g41300 LOC_Os01g08540 LOC_Os02g03460 LOC_Os08g05490 More.. |
| Downstream Genes | LOC_Os10g36470 LOC_Os12g35630 LOC_Os09g24220 LOC_Os11g05570 LOC_Os12g07700 LOC_Os11g07916 |
| Database Links | |
|---|---|
| Gramene | LOC_Os08g42080.1 |
| Rice Genome Annotation | LOC_Os08g42080.1 |
| Ricechip | LOC_Os08g42080.1 |
| KEGG | osa:4346144 dosa:Os08t0533300-01 |
| Entrez-Gene | 4346144 |