RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os08g42380.1 View Network Show in Genome Browser |
| Other Names | Os08g0535600 |
| Description | mitochondrial import inner membrane translocase subunit Tim, putative, expressed |
| Gene Attributes | Chromosome: Chr8 CDS Coordinates (5'-3'): 26749936-26751013 Nucleotide Length: 258 |
| Protein-coding | LOC_Os08g42380 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0016043 | cellular component organization | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0005215 | transporter activity | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005739 | mitochondrion | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g61019 LOC_Os02g45820 LOC_Os03g02390 LOC_Os04g42270 LOC_Os05g28750 LOC_Os01g19840 LOC_Os05g48310 LOC_Os05g48220 LOC_Os02g54470 LOC_Os05g51640 LOC_Os05g08360 More.. |
| Downstream Genes | LOC_Os12g38310 LOC_Os10g37530 LOC_Os11g37080 LOC_Os09g29840 LOC_Os10g27174 LOC_Os09g24690 LOC_Os10g32550 LOC_Os09g08430 LOC_Os09g33480 LOC_Os12g05430 LOC_Os08g44450 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os08g42380.1 |
| Rice Genome Annotation | LOC_Os08g42380.1 |
| Ricechip | LOC_Os08g42380.1 |
| KEGG | osa:4346155 dosa:Os08t0535600-01 |
| Entrez-Gene | 4346155 |