RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os08g42420.1 View Network Show in Genome Browser |
| Other Names | Os08g0536100 |
| Description | expressed protein |
| Gene Attributes | Chromosome: Chr8 CDS Coordinates (5'-3'): 26785461-26791067 Nucleotide Length: 2109 |
| Protein-coding | LOC_Os08g42420 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os08g39300 LOC_Os01g12810 LOC_Os04g31340 LOC_Os02g55200 |
| Downstream Genes | LOC_Os12g01449 LOC_Os11g01439 LOC_Os11g17610 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR1858a osa-miR1858b |
| Database Links | |
|---|---|
| Gramene | LOC_Os08g42420.1 |
| Rice Genome Annotation | LOC_Os08g42420.1 |
| Ricechip | LOC_Os08g42420.1 |
| KEGG | osa:4346160 dosa:Os08t0536100-03 |
| Entrez-Gene | 4346160 |