RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os08g42540.1 View Network Show in Genome Browser |
| Other Names | Os08g0537800 |
| Description | ubiquitin thioesterase otubain-like, putative, expressed |
| Gene Attributes | Chromosome: Chr8 CDS Coordinates (5'-3'): 26882955-26887363 Nucleotide Length: 825 |
| Protein-coding | LOC_Os08g42540 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g58960 LOC_Os03g55130 LOC_Os02g54090 LOC_Os05g24601 LOC_Os05g35720 LOC_Os02g02480 LOC_Os03g60870 LOC_Os06g20400 LOC_Os01g46926 LOC_Os04g57480 LOC_Os04g52850 More.. |
| Downstream Genes | LOC_Os09g12230 |
| Database Links | |
|---|---|
| Gramene | LOC_Os08g42540.1 |
| Rice Genome Annotation | LOC_Os08g42540.1 |
| Ricechip | LOC_Os08g42540.1 |
| KEGG | osa:4346169 dosa:Os08t0537800-01 |
| Entrez-Gene | 4346169 |