RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os08g42620.1 View Network Show in Genome Browser |
| Other Names | Os08g0539100 |
| Description | zinc finger DHHC domain-containing protein, putative, expressed |
| Gene Attributes | Chromosome: Chr8 CDS Coordinates (5'-3'): 26938776-26942169 Nucleotide Length: 1275 |
| Protein-coding | LOC_Os08g42620 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os07g12770 LOC_Os03g60260 LOC_Os06g43680 LOC_Os02g09130 LOC_Os04g51380 LOC_Os05g35050 LOC_Os01g56420 LOC_Os02g11830 LOC_Os01g56430 LOC_Os06g05180 LOC_Os08g08820 More.. |
| Downstream Genes | LOC_Os11g34860 LOC_Os09g38440 LOC_Os10g40590 LOC_Os11g43640 |
| Database Links | |
|---|---|
| Gramene | LOC_Os08g42620.1 |
| Rice Genome Annotation | LOC_Os08g42620.1 |
| Ricechip | LOC_Os08g42620.1 |
| KEGG | osa:4346178 dosa:Os08t0539100-01 |
| Entrez-Gene | 4346178 |