RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os08g42760.1 View Network Show in Genome Browser |
| Other Names | Os08g0540500 |
| Description | methyltransferase domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr8 CDS Coordinates (5'-3'): 27064824-27068182 Nucleotide Length: 948 |
| Protein-coding | LOC_Os08g42760 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| GO:0005737 | cytoplasm | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os04g58060 LOC_Os04g31000 LOC_Os02g56020 LOC_Os02g51030 LOC_Os01g03090 LOC_Os03g56830 LOC_Os02g38060 LOC_Os07g47500 LOC_Os07g20150 LOC_Os01g49250 LOC_Os04g52400 More.. |
| Downstream Genes | LOC_Os08g42770 LOC_Os12g10200 LOC_Os11g35340 LOC_Os10g34740 |
| Database Links | |
|---|---|
| Gramene | LOC_Os08g42760.1 |
| Rice Genome Annotation | LOC_Os08g42760.1 |
| Ricechip | LOC_Os08g42760.1 |
| KEGG | osa:4346188 dosa:Os08t0540500-01 |
| Entrez-Gene | 4346188 |