RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os08g43080.1 View Network Show in Genome Browser |
| Other Names | Os08g0543800 |
| Description | POLD4B - Putative DNA polymerase delta complex subunit, expressed |
| Gene Attributes | Chromosome: Chr8 CDS Coordinates (5'-3'): 27229246-27229742 Nucleotide Length: 405 |
| Protein-coding | LOC_Os08g43080 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0006259 | DNA metabolic process | Biological Process | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os07g44970 LOC_Os02g56130 LOC_Os05g05260 LOC_Os01g49680 LOC_Os04g58350 LOC_Os03g03650 LOC_Os03g10780 LOC_Os03g57870 LOC_Os02g03340 LOC_Os07g36500 LOC_Os05g39050 More.. |
| Downstream Genes | LOC_Os12g13950 LOC_Os11g08330 LOC_Os10g37490 LOC_Os10g34750 LOC_Os10g39410 LOC_Os09g38020 LOC_Os09g26340 LOC_Os12g07720 LOC_Os11g36390 LOC_Os11g28350 |
| Database Links | |
|---|---|
| Gramene | LOC_Os08g43080.1 |
| Rice Genome Annotation | LOC_Os08g43080.1 |
| Ricechip | LOC_Os08g43080.1 |