RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os08g43190.1 View Network Show in Genome Browser |
| Other Names | Os08g0545200 |
| Description | dehydrogenase, putative, expressed |
| Gene Attributes | Chromosome: Chr8 CDS Coordinates (5'-3'): 27315938-27318495 Nucleotide Length: 1185 |
| Protein-coding | LOC_Os08g43190 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os04g41960 LOC_Os01g66720 LOC_Os01g70370 LOC_Os04g30420 LOC_Os01g54940 LOC_Os01g70360 LOC_Os07g33850 LOC_Os03g14800 LOC_Os02g56300 LOC_Os02g05680 LOC_Os01g22520 More.. |
| Downstream Genes | LOC_Os11g01154 LOC_Os12g01160 LOC_Os11g31640 LOC_Os10g11200 LOC_Os10g40570 LOC_Os11g05970 LOC_Os10g28000 LOC_Os12g12580 LOC_Os12g12590 LOC_Os12g12470 LOC_Os12g12560 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os08g43190.1 |
| Rice Genome Annotation | LOC_Os08g43190.1 |
| Ricechip | LOC_Os08g43190.1 |
| KEGG | osa:4346217 dosa:Os08t0545200-01 |
| Entrez-Gene | 4346217 |