RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os08g43300.1 View Network Show in Genome Browser |
| Other Names | Os08g0546400 |
| Description | UBX domain-containing protein, putative, expressed |
| Gene Attributes | Chromosome: Chr8 CDS Coordinates (5'-3'): 27365105-27370831 Nucleotide Length: 1749 |
| Protein-coding | LOC_Os08g43300 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os04g39040 LOC_Os04g57520 LOC_Os05g33850 LOC_Os04g55150 LOC_Os01g16330 LOC_Os01g70140 LOC_Os02g10510 LOC_Os06g43550 LOC_Os02g08300 LOC_Os03g10750 LOC_Os06g12690 More.. |
| Downstream Genes | LOC_Os11g02080 LOC_Os09g23690 LOC_Os10g37630 LOC_Os11g18880 |
| Database Links | |
|---|---|
| Gramene | LOC_Os08g43300.1 |
| Rice Genome Annotation | LOC_Os08g43300.1 |
| Ricechip | LOC_Os08g43300.1 |
| KEGG | osa:4346226 dosa:Os08t0546400-01 |
| Entrez-Gene | 4346226 |