RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os08g43540.1 View Network Show in Genome Browser |
| Other Names | Os08g0548900 |
| Description | peptidase, T1 family, putative, expressed |
| Gene Attributes | Chromosome: Chr8 CDS Coordinates (5'-3'): 27533250-27537106 Nucleotide Length: 960 |
| Protein-coding | LOC_Os08g43540 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0019538 | protein metabolic process | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005622 | intracellular | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| GO:0005773 | vacuole | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os07g25420 LOC_Os02g10640 LOC_Os02g21970 LOC_Os07g49150 LOC_Os03g08280 LOC_Os04g56646 LOC_Os03g18690 LOC_Os06g09290 LOC_Os02g54340 LOC_Os06g40560 LOC_Os03g63430 More.. |
| Downstream Genes | LOC_Os09g32800 LOC_Os09g33986 LOC_Os11g40140 LOC_Os09g32274 LOC_Os08g43640 LOC_Os09g37000 LOC_Os09g15750 LOC_Os09g25310 LOC_Os11g48030 LOC_Os11g26910 LOC_Os09g36830 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os08g43540.1 |
| Rice Genome Annotation | LOC_Os08g43540.1 |
| Ricechip | LOC_Os08g43540.1 |
| KEGG | osa:4346245 dosa:Os08t0548900-01 |
| Entrez-Gene | 4346245 |