RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os08g43654.1 View Network Show in Genome Browser |
| Other Names | Os08g0550200 |
| Description | MATE efflux family protein, putative, expressed |
| Gene Attributes | Chromosome: Chr8 CDS Coordinates (5'-3'): 27592835-27598700 Nucleotide Length: 1569 |
| Protein-coding | LOC_Os08g43654 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0009835 | ripening | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0005215 | transporter activity | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005773 | vacuole | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g62200 LOC_Os01g55110 LOC_Os01g65000 LOC_Os02g34580 LOC_Os01g61510 LOC_Os05g39240 LOC_Os01g61550 |
| Downstream Genes | LOC_Os12g01580 LOC_Os10g13940 LOC_Os09g37610 LOC_Os12g01420 LOC_Os11g01410 |
| Database Links | |
|---|---|
| Gramene | LOC_Os08g43654.1 |
| Rice Genome Annotation | LOC_Os08g43654.1 |
| Ricechip | LOC_Os08g43654.1 |
| KEGG | osa:4346253 dosa:Os08t0550200-01 |
| Entrez-Gene | 4346253 |